PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn046371
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Nin-like
Protein Properties Length: 642aa    MW: 72846.2 Da    PI: 7.4146
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn046371genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK32.41.8e-102733012452
      RWP-RK  24 eLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +L ++ ++ Kr CR+yGI+RWP R + ++
  Achn046371 273 KLSLSISTFKRVCRKYGINRWPPRNVDKV 301
                 6888999******************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS515199.761231321IPR003035RWP-RK domain
PfamPF020421.3E-7273301IPR003035RWP-RK domain
SuperFamilySSF542773.27E-17337430No hitNo description
Gene3DG3DSA:3.10.20.2403.7E-16345425No hitNo description
PROSITE profilePS5174523.309345428IPR000270PB1 domain
SMARTSM006661.2E-11345428IPR000270PB1 domain
PfamPF005644.4E-14345426IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    Send to blast
MAVLLKQEKN DNKAHKKASV EMKRDLRLLL NIYKLPLALT WVSCGACKTL LPVEDLYMVR  60
KYYGENFGEL NSFSMGTCRL PLRNERGVVG RVLSSPNLLY CSDVTQLSVA EYPFAHFARQ  120
CRLRGCFAIN LRSNYTGNNV YVLQIFLPDI NKDEDPLTSL SKILETMKKK FKTFRLASGE  180
VLVSIIEFQN GEQHHCVQAL QVTGYLPSLE PSQNGGERIE ADSSDHQLND AEQCVIDVNH  240
PQELGTKMTS GREHKNTGVR IEILYEDILR YSKLSLSIST FKRVCRKYGI NRWPPRNVDK  300
VRPPASHVDH QEEVPQLNSN LPSNQASASI AHTQPHDTVM QNANTVNVKA KYGNDITIKF  360
QLSLSSGLVE LQQQVAKRLN LEAGSYHIKY KDEEDELILI ACYEDLQDCI RTCRSPGSNA  420
VVLHIDQISQ VNHTKSVTPV PYIDCFPASL RPYIRHVNNV AFDGNCGFRA IAGLMNIGED  480
DGWVQVRRDL LTELNLHVDD YKIMYGQQRI DELTHCLSWF DGFSEMDRWM TMPDMGHLIA  540
SRYNVVLYHL SNKQCLTFLP LRSLPIPAAS RREITIGFVN NNHFVEVFLF PGHPVPPVAG  600
LWMQYRSPCA QGWDTAYNLR IQHFRKLVDS NVATTDVISV D*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.15e-29Nin-like family protein